vg
tools for working with variation graphs
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vg::DozeuPinningOverlay Member List

This is the complete list of members for vg::DozeuPinningOverlay, including all inherited members.

DozeuPinningOverlay(const HandleGraph *graph, bool preserve_sinks)vg::DozeuPinningOverlay
DozeuPinningOverlay()=defaultvg::DozeuPinningOverlay
duplicated_handlesvg::DozeuPinningOverlayprivate
flip(const handle_t &handle) constvg::DozeuPinningOverlay
follow_edges_impl(const handle_t &handle, bool go_left, const function< bool(const handle_t &)> &iteratee) constvg::DozeuPinningOverlay
for_each_handle_impl(const function< bool(const handle_t &)> &iteratee, bool parallel=false) constvg::DozeuPinningOverlay
get_duplicate_handle(const handle_t &handle) constvg::DozeuPinningOverlayprivate
get_handle(const id_t &node_id, bool is_reverse=false) constvg::DozeuPinningOverlay
get_id(const handle_t &handle) constvg::DozeuPinningOverlay
get_is_reverse(const handle_t &handle) constvg::DozeuPinningOverlay
get_length(const handle_t &handle) constvg::DozeuPinningOverlay
get_node_count() constvg::DozeuPinningOverlay
get_sequence(const handle_t &handle) constvg::DozeuPinningOverlay
get_underlying_handle(const handle_t &handle) constvg::DozeuPinningOverlay
get_underlying_id(const id_t &node_id) constvg::DozeuPinningOverlayprivate
graphvg::DozeuPinningOverlayprivate
handle_val_rangevg::DozeuPinningOverlayprivate
has_node(id_t node_id) constvg::DozeuPinningOverlay
is_a_duplicate_handle(const handle_t &handle) constvg::DozeuPinningOverlayprivate
is_a_duplicate_id(const id_t &node_id) constvg::DozeuPinningOverlayprivate
max_handlevg::DozeuPinningOverlayprivate
max_node_id() constvg::DozeuPinningOverlay
min_node_id() constvg::DozeuPinningOverlay
num_null_nodesvg::DozeuPinningOverlayprivate
performed_duplications() constvg::DozeuPinningOverlay
preserve_sinksvg::DozeuPinningOverlayprivate
~DozeuPinningOverlay()=defaultvg::DozeuPinningOverlay